HyCODE Publications

HyCODE Publications

Refereed Papers ONR PI Reports HyCODE Proposal Abstracts

HyCODE-Related Refereed Papers

  • Andrefouet, S., F.E. Muller-Karger, E.J. Hochberg, C. Hu, K.L. Carder, Change detection in shallow coral reef environments using Landsat 7 ETM+ data, Remote Sensing of the Environment, 78, 150-162, 2001.

  • Arnone, R. A. and R. W. Gould, Mapping Coastal Processes with Optical Signatures, Backscatter, 12(1), 17-24, 2001.

  • Barnard, A. H., J. R. V. Zaneveld, and W. S. Pegau, Remotely sensed reflectance and the absorption coefficient: closure and inversion, Appl. Opt., 38, 5108-5117, 1999.

  • Bergmann, T., Fahnensteil, G., Lohrenz, S., Millie, D. F., Schofield, O, The effect of a spring turbidity event on spectral light fields and phytoplankton community dynamics, Journal of Geophysical Research (submitted), 2003.

  • Bissett, W. P. and M. A. Moline, A Path to Predicting Water-Leaving Bioluminescence Radiance in the Coastal Ocean, Oceanography, submitted, 2003.

  • Bissett, W. P, O. Schofield, S. Glenn, J. J. Cullen, W. L. Miller, A. J. Plueddemann, and C. D. Mobley, Resolving the impacts and feedbacks of ocean optics on upper ocean ecology, Oceanography, 14, 30-49, 2001.

  • Bissett, W. P., O. Schofield, C. D. Mobley, M. F. Crowley, and M. A. Moline, Optical remote sensing techniques in biological oceanography, Chapter 26 in Methods in Microbiology, Vol. 30, Academic Press, 2001.

  • Blackwell, S., Case, J., Glenn, S. M., Kohut, J., Moline, M. A., Purcell, M., Schofield, O., C. von Alt, A New AUV Platform for Studying Near Shore Bioluminescence Structure, In: 12th International Symposium on Bioluminescence and Chemiluminescence, World Scientific Publishing Company, Singapore, In Press, 2003.

  • Boss, E., W. S. Pegau, M. Lee, M. S. Twardowski, E. Shybanov, G. Korotaev, and F. Baratange, The particulate backscattering ratio at LEO-15 and its use to study particles composition and distribution, J. Geophys. Res., submitted, 2003.

  • Boss, E. and W. S. Pegau, The relationship of light scattering at an angle in the backward direction to the backscattering coefficient, Applied Optics, 40, 5503-5507, 2001.
    --Download a submitted draft of this Paper with Figures (*.PDF; 210 KB)

  • Boss, E. and W. S. Pegau, The relationship of light scattering at an angle in the backward direction to the backscattering coefficient, Appl. Opt., 40, 5503-5507, 2001.

  • Boss E., M. S. Twardowski and S. Herring, The shape of the particulate beam attenuation spectrum and its relaton to the size distribution of oceanic particles, Applied Optics, 40, 4885-4893, 2001.

  • Carder, K. L., D. K. Costello, H. Warrior, L. C. Langebrake, W. Hou, J. T. Patten, and E. Kaltenbacher, Ocean-Science Mission Needs: Real-Time AUV Data for Command, Control, and Model Inputs, IEEE Jour. of Ocean. Eng., 26(4) 742-751, 2001.

  • Carder, K. L., C. Liu, D. K. Costello, J. T. Patten, W. Hou, and C. Davis: Illumination and Turbidity Effects on Observing Facetted Bottom Elements with Uniform Lambertian Albedos, Limnol. and Oceanogr., 48, 355-363, 2003.

  • Cattrall, C., K.L. Carder, K. Thome, and H. Gordon, Solar-reflectance-based calibration of spectral radiometers, Geophys. Res. Lett., 29(20), 1029-1033, 2002.

  • Chang, G. C., T. D. Dickey, E. Boss, C. D. Mobley and W. S. Pegau, Toward Closure of Upwelling Radiance in Coastal Waters, Appl. Opt., 42, 1574-1582, 2003.
    --Download the Published Paper (*.PDF; 360KB)

  • Chang, G. C., T. D. Dickey, O. M. Schofield, A. D. Weidemann, E. Boss, W. S. Pegau, M. A. Moline, and S. M. Glenn, Nearshore physical processes and bio-optical properties in the New York Bight, J. Geophys. Res., J. Geophys. Res., 107 (C9), 3133, doi 10.1029/2001JC001018, 2002.
    --Download the Published Paper (*.PDF; 1.1 MB)

  • Costello, D.K. , K.L. Carder, J. Ivey, D. English, and W. Hou, Measurement and Interpretation of Diffuse Attenuation and Reflectance in Clear, Deep-Water Environments: the Effects of Trans-spectral Phenomena, to be submitted to Applied Optics.

  • Costello, D.K. , K.L. Carder, J. Ivey, D. English, W. Hou, and T. G. Peacock, Measurement and Interpretation of Diffuse Attenuation and Reflectance in Non-homogenous Shallow Water Environments to be submitted to Applied Optics.

  • Davis, C. O., J. Bowles, R. A. leathers, D. Korwan, T. V. Downes, W. A. Snyder, W. J. Rhea, W. Chen, J. Fisher, W. P. Bissett and R. A. Reisse, Ocean PHILLS hyperspectral imager: design, characterization, and calibration, Optics Express, 10(4): 210-221, 2002.

  • Davis, C. O., G. M. Lamela, T. F. Donato, and C. M. Bachmann, Coastal Margins and Estuaries, in: Manual of Remote Sensing, Vol. 5: Natural Resources and Environment, edited by S. Ustin, in press, 2003.

  • Dickey, T. D. and G. C. Chang, Temporal variability of optical properties of the ocean: Recent advances and future visions, Oceanography, 14, 15-29, 2001.

  • D’Sa, E.J., C. Hu, F.E. Muller-Karger and K.L. Carder, Estimation of colored dissolved organic matter and salinity fields in Case 2 waters using SeaWiFS: Examples from Florida Bay and Florida Shelf, Proc. Indian Acad. Sci. (Earth Planet. Sci.), 111(3), 197-207, 2002.

  • Evens, T. J., Kirkpatrick, G. J., Millie, D. F., Chapman, D., Schofield, O., Xanthophyll-cycling and photophysiological regulation of Gymnodinium breve in response to fluctuating natural irradiance, Journal of Plankton Research, 23, 1177-1194, 2001.

  • Glenn, S. M., Schofield, O., Bergmann, T., Chant, R., Crowley, M., Cullen, J., Haidvogel, D., Kohut, J., Moline, M. A., Studying the Biogeochemical Impact of Summertime Upwelling Using a Coastal Ocean Observatory, Journal of Geophysical Research (submitted), 2003.

  • Gould, R. W., Jr., R. A. Arnone, and M. Sydor. 2001. Absorption, scattering, and particle size relationships in coastal waters: Testing a new reflectance algorithm. Journal of Coastal Research, 17(2): 328-341.

  • Gould, R. W., Jr., and R. A. Arnone. 2002. Coastal optical properties estimated from airborne sensors. Remote Sensing of Environment, 79(1): 138-142.

  • Gould, R.W., Jr. and R.A. Arnone. Tracing coastal transport of organic and inorganic matter with ocean color remote sensing. Submitted, NRL Review - 2002.

  • Gould, R. W., Jr., and R. A. Arnone. Temporal and spatial variability of satellite sea surface temperature and ocean color in the Japan/East Sea. International Journal of Remote Sensing.

  • Gould, R.W., Jr., and R.A. Arnone. Three-dimensional fields of salinity and total suspended solids derived from ocean color satellite imagery. Journal of Atmospeheric and Oceanic Technology, submitted.

  • He, R. and R. H. Weisberg, West Florida shelf circulation and temperature budget for the 1999 spring transition, Cont. Shelf Res., 22, 719-748, 2001.
    --Read the Abstract.

  • He, R. and R.H. Weisberg, Tides on the West Florida Shelf, J. Phys. Oceanogr., 32, 3455-3473, 2002.

  • He, R and R.H. Weisberg, A Loop Current intrusion case study on the West Florida Shelf, J. Phys. Oceanogr., in press, 2003.

  • He, R and R.H. Weisberg, West Florida shelf circulation and temperature budget for the 1998 fall transition, Cont. Shelf Res., in press, 2003.

  • Hou W., K. L. Carder, K. Du, D. C. English, D. C., Costello, Large-scale Bottom Classification Using Multi-channel Imagery from an Autonomous Underwater Vehicle (AUV), Limnol. and Oceanogr., submitted, 2002.

  • Hu, C. and K.L. Carder, Atmospheric correction for airborne sensors: Comment on a scheme for CASI, Remote Sens. Environ., 70, 134-137, 2002.

  • Hu, C., K.L. Carder, and F. Muller-Karger, Atmospheric correction of SeaWiFS imagery over turbid coastal waters: a practical method, Remote Sensing Environ., 74, 195-206, 2000.

  • Hu, C., K.L. Carder, and F. Muller-Karger, Atmospheric correction of SeaWiFS imagery: assessment of alternative bands, Appl. Opt., 39(21), 3573-3581, 2000.

  • Hu, C., K.L. Carder, F.E. Muller-Karger, How precise are SeaWiFS ocean color estimates? Implication of digitization-noise errors, Remote Sensing of the Environment, 76, 434-457, 2001.

  • Hu, C., F.E. Muller-Karger, S. Andrefouet, K.L. Carder, Atmospheric Correction and Cross-Calibration of Landsat-7/ETM+ Imagery Over Aquatic Environments: A multiplatform approach using SeaWiFS/MODIS, Remote Sensing of the Environment, 78, 99-107, 2001.

  • Hu, C., F.E. Muller-Karger, D.C. Biggs, K.L. Carder, B. Nababan, D. Nadeau, and J. Vanderbloemen, Comparison of ship and satellite bio-optical measurements on the continental margin of the NE Gulf of Mexico, International Journal of Remote Sensing, in press, 2003

  • Ivey, J., K. L. Carder, Z. P. Lee, et al., Determination of the Absorption Coefficient of Optically Clear Tropical Water, to be submitted to Applied Optics.

  • Johnson, D. R., A. Weidemann, and W. S. Pegau, Internal bores and bottom nepheloid layers, Cont. Shelf Res., 1473-1484, 2001.

  • Johnson, D. R., A. Weidemann, R. Arnone, and C. O. Davis, 2001, Chesapeake Bay outflow plume and coastal upwelling events: Physical and optical properties. Journal Geophysical Research 106(C6): 11,613-11,622.

  • Johnson, D. M., Miller, J., Schofield, O, Dynamics and optics of the Hudson River outflow plume, Journal of Geophysical Research, In Press, 2003.

  • Johnson, D.J., M. Kappus, C.Davis, and J. Rhea. Aircraft spectrometer imaging of the Chesapeake Bay outflow plume. Remote Sensing of the Environment, submitted, 2003.

  • Kirkpatrick, G., D. F. Millie, M. A. Moline, and O. Schofield, Absorption-based discrimination of phytoplankton species in naturally mixed populations, Limnology and Oceanography, 42, 467-471, 2000.

  • Kirkpatrick, G. J., Orrico, C., Oliver, M. J., Moline, M. A., Schofield, O, Continuous real-time determination of hyperspectral absorption of colored dissolved organic matter, Applied Opitcs (submitted), 2003.

  • Komada, T., Schofield, O., Reimers, C., Fluorescence characteristics of organic matter released from coastal sediments during resuspension, Marine Chemistry, 79(2), 81-97, 2002.

  • Ladner, S., Arnone, R. A., Gould, R. W., and P. Martinolich. Evaluation of SeaWiFS Optical Products in Coastal Regions. Sea Technology, October 2002, 43(10): 29-35.

  • Leathers, R. A., T. V. Downes, and C. D. Mobley, Self-shading correction for upwelling sea-surface radiance measurements made with buoyed instruments, Optics Express, 8, 561-570, 2001.

  • Leathers, R. A., T. V. Downes and C. O. Davis, Analysis of a point-source integrating-cavity absorption meter, Appl. Opt., 39(33), 6118-6127, 2000.

  • Lee, Z. P., K. L. Carder, C. D. Mobley, R. G. Steward, and J. S. Patch, Hyperspectral remote sensing for shallow waters: 1. a semianalytical model, Appl. Opt., 37, 6329-6338, 1998.

  • Lee, Z. P., K. L. Carder, C. D. Mobley, R. G. Steward, and J. S. Patch, Hyperspectral remote sensing for shallow waters: 2. deriving bottom depths and water properties by optimization, Appl. Opt., 38, 3831-3843, 1999.

  • Lee, Z. P., K. L. Carder, R. F. Chen, and T. G. Peacock, Properties of the water column and bottom derived from AVIRIS data, J. Geophys. Res., 106, 11,639-11,651, 2001.

  • Lee, Z. and K.L. Carder, Band-ratio or spectral curvature algorithms for satellite remote sensing? Appl. Opt., 39(24), 4377:4380, 2000.

  • Lee, Z. P. and K. L. Carder, Effect of Spectral Band Numbers on the Retrieval of Water Column and Bottom Properties from Ocean Color Data, Applied Optics, (41) 12, 2191-2201, 2002.

  • Lee, Z. P., K. L. Carder and R. Arnone, Deriving Inherent Optical Water Properties From Water Color: A Multi-Band Quasi-Analytical Approach, Applied Optics, (41) 27, 5755-5772, 2002.

  • Lee, Z. P., K. L. Carder, K. P. Du, Relationship between remote-sensing reflectance and inherent optical properties of optically deep waters: a revisit, Appl. Opt., in review, 2003.

  • Li, Z. and R.H. Weisberg, West Florida Shelf response to upwelling favorable wind forcing: Kinematics, J. Geophys. Res., 104, 13507-13527, 1999.

  • Li, Z. and R.H. Weisberg, West Florida continental shelf response to upwelling favorable wind forcing, 2: Dynamics, J. Geophys. Res., 104, 23427-23442, 1999.

  • Liu, C.C., K.L. Carder, R. Miller, and J. Ivey, Underwater scalar irradiance model for simulating the oceanic system, Applied Optics, (41) 24, 4962-4974, 2002.

  • Maffione, R.A., and D.R. Dana, 2000. In-situ laser imaging system for measuring the volume scattering function at 180 degrees, J. Atmos. Ocean. Technol, 17, 1171-1188.

  • Maffione, R.A., 2001. Evolution and revolution in measuring ocean optical properties, Oceanography, 14, 9-14.

  • Maffione, R.A., J. Kaldy, P. Eldridge, and L. Cifuentes. Semi-empirical model of the benthic spectral-downwelling irradiance in high suspended sediment environments, Estuaries, (in press), 2003.

  • Maffione, R.A., K. Dunton, and C. Aumack. Effects of resuspended sediments on the optical properties and light attenuation of waters around Prudhoe Bay, Alaska, Estuaries, (in press), 2003.

  • Maffione, R.A., F. Chavez, and B. Penta. Computationally rapid model for calculating the spectral downwelling irradiance attenuation coefficient of ocean waters, Optics Express (submitted), 2003.

  • Maffione, R.A., and D.R. Dana. New Instrument and method for measuring the volume scattering function from 5 to 170 degrees in situ, J. Atmos. Ocean. Technol, (submitted), 2003.

  • Maffione, R.A., M.A. Godin, and D.R. Dana. Hyperspectral radiometer buoy for accurate determination of water-leaving radiance and remote-sensing reflectance, J. Atmos. Ocean. Technol, (submitted), 2003.

  • Maffione, R.A., Theoretical developments on the optical properties of highly turbid waters, Limnol. & Oceanogr., 43, 29-33, 1998.

  • Maffione, R.A., and D.R. Dana, Instruments and methods for measuring the backward-scattering coefficient of ocean waters, Appl. Opt., 36, 6057-6067, 1997.

  • Meyers, S.D., E.M. Siegel, and R.H. Weisberg, Observations of currents on the west Florida shelf break, Geophys. Res. Lett., 28, 2037-2040, 2001.

  • Millie, D. F., Schofield, O., Kirkpatrick, G. J., Johnsen, G., Evens, T. J., Using absorbance and fluorescence spectra to discriminate microalgae, European Journal of Phycology, 37,313-322, 2002.

  • Ming-Xia, H., Z.Liu, K.Du, L. Li, R. Chen, K.L. Carder, and Z. Lee, Retrieval of chlorophyll from remote sensing reflectance in the China seas, Appl. Opt., 39(15), 2467-2474, 2000.

  • Mobley, C. D., Estimation of the remote-sensing reflectance from above-surface measurements, Applied Optics, 38, 7442-7455, 1999.

  • Mobley, C. D., L. K. Sundman, and E. Boss, Phase function effects on oceanic light fields, Applied Optics, 41, 1035-1050, 2002.
    --Download the accepted version of this Paper (*.PDF; 397 KB)

  • Mobley, C. D., H. Zhang, and K. J. Voss, Effects of optically shallow bottoms on upwelling radiances: Bidirectional reflectance distribution function effects, Limnol. Oceanogr., 48, 337-345, 2003.

  • Mobley, Curtis D., and Lydia K. Sundman, Effects of optically shallow bottoms on upwelling radiances: Inhomogeneous and sloping bottoms, Limnol. Oceanogr., 48, 329-336, 2003.

  • Moline, M. A., E. Heine, J. Case, C. Herren, and O. Schofield, Spatial and temporal variability of bioluminescence potential in coastal regions, in: Bioluminescence and Chemiluminescence 2000, edited by J. F. Case, P. J. Herring, S. H. D. Haddock, L. J. Kricka, and P. E. Stanley, World Scientific Publishing Company, Singapore, pp. 123-126, 2001.

  • Moline, M. A., R. Arnone, T. Bergmann, S. Glenn, M. Oliver, C. Orrico, O. Schofield, and S. Tozzi, Variability in spectral backscatter estimated from satellites and its relation to in situ measurements in optically complex coastal waters, Journal of International Remote Sensing, in press, 2003.

  • Moline, O., Schofield, O., Gryzmski, J., Impact of dynamic light and nutrient environments on phytoplankton communities in the coastal ocean, In: Modeling Dynamic Systems: Dynamic Modeling for Marine Conservation Ecological Understanding, Lindholm, J. and Ruth, M. (eds), Springer Verlag, pp. 144-163, 2002.

  • Moline, M. A. Bergmann, T., Blackwell, S.,Chant, R., Glenn, S. M., Oliver, M. A., Orricco, C., Schofield, O., Physical forcing of coastal phytoplankton community composition in the Mid-Atlantic Bight, Journal of Geophysical Research (submitted), 2003.

  • Oliver, M. W., Schofield, O., Bergmann, T., Glenn, S. M., Moline, M. A., Orrico, C, In-situ optically derived phytoplankton absorption properties in coastal waters and its utility for estimating primary productivity rates, Journal of Geophysical Research (submitted), 2003.

  • Otis, D.B., K.L. Carder, D.C. English, J.E. Ivey, J. Patch, Using SeaWiFS imagery and optical property measurements to investigate the Bahamas Banks as a source og gelbstoff to the surrounding deep ocean, Limnoogy. and Oceanography, submitted, 2002.

  • Pegau W. S., E. Boss and A. Martinez, Ocean color observations of eddies in the Gulf of California during the summer, Geophysics review letters, accepted, 2002.

  • Prentice, J.E., D.M. Allocca, B.M. Concannon, V.M. Contarino, T. Curran, A. Laux, M. London, and L. J. Mullen, Oceanographic LIDAR analysis: establishing quantitative relationships between the KSS and in situ measurements of bio-optical properties in coastal and open ocean waters, Oceanography, 14, p. 44, 2001.

  • Roesler, C. S. and E. Boss, A novel ocean color inversion model: retrieval of beam attenuation and particle size distribution, Journal?, in press, 2003.

  • Schofield, O., J. Gryzmski, P. Bissett, G. Kirkpatrick, D. F. Millie, M. A. Moline, ad C. Roesler, Optical monitoring and forecasting systems for harmful algal blooms: Possibility or pipedream?, Journal of Phycology, 35, 125-145, 1999.

  • Schofield, O., Bergmann, T., Kohut, J., Glenn, S. A, Coastal ocean observatory for studying nearhsore coastal processes, Backscatter, 12, 34-37, 2001.

  • Schofield, O., T. Bergmann, W. P. Bissett, F. Grassle, D. Haidvogel, J. Kohut, M. Moline, and S. Glenn, Linking regional coastal observatories to provide the foundation for a national ocean observation network, Journal of Oceanic Engineering, 27(2), 146-154, 2002.

  • Schofield, O., S. Glenn, R. Chant, M. A. Moline, P. Bissett, D. Haidvogel, and J. Wilkins, The evolution of a nearshore coastal observatory and the establishment of the New Jersey Shelf Observing System, Oceanology International, 2002.

  • Schofield, O., Bergmann, T., Bissett, W. P. Moline, M. A., Orrico, C., Oliver, M, Inverting inherent optical signatures in the nearshore coastal waters at the Long Term Ecosystem Observatory, Journal of Geophysical Research (submitted), 2003.

  • Schofield, O., Bergmann, T., Bissett, W. P., Kohut, J., Iglesias-Rodriguez, D., Moline, M. A., Glenn, S.M. The utility of ocean observatories for coastal resource management, J. Marine Technology, Special Issue “Application of New Technologies for Marine Sanctuaries”, (submitted), 2003.

  • Shulman, I., S.H.D. Haddock, D. J. McGillicuddy, Jr., J. D. Paduan, and W. P. Bissett, Numerical Modeling of Bioluminescence Distributions in the Coastal Ocean, J. Atmos. Ocean. Tech., in revision, 2003.

  • Stephens, F.C., E.M. Louchard, R.P. Reid, and R.A. Maffione. Effects of microalgal communities on radiance reflectance spectra of carbonate sediments in subtidal optically shallow marine environments, Limnol. & Oceanogr., (in press), 2003.

  • Stumpf, R. P., R. A. Arnone, V. Ransibrahmanakul, R. W. Gould, and P. Martinolich. A Partially-Coupled Ocean Atmosphere Model for Retrieval of Water leaving Radiance from SeaWIFS in Coastal Waters” Submitted NASA TM- SeaWIFS Project Office Aug. 2002 (Blue Book Series).

  • Sydor M., D. B. Wolz, and A.M. Thralow. 2002. Spectral analysis of bulk reflectance from coastal waters. J. Coastal Research, 18(2): 352-361.

  • Sydor, M. Treatment of remote sensing reflectance from coastal ocean waters in terms ot the probability for multiple scattering. J. Int. Remote Sensing, submitted, 2003.

  • Terrill, E. J., W. K. Melville, and D. Stramski, Bubble entrainment by breaking waves and their influence on optical scattering in the upper ocean, J. Geophys. Res., in press, 2001.

  • Tozzi, S., O. Schofield, T. Bergmann, M. A. Moline, and R. Arnone, Variability in measured and modeled remote sensing reflectance in coastal waters at LEO-15, Journal of International Remote Sensing, in press, 2003.

  • Twardowski M., E. Boss, J. B. Macdonald, W. S. Pegau, A. H. Barnard, and J. R. V. Zaneveld, A model for estimating bulk refractive index from the optical backscattering ratio and the implications for understanding particle composition in case I and case II waters, J. Geophys. Res., 106, 14,129-14,142, 2001.

  • Virmani, J.I. and R.H. Weisberg, Features of the Observed Annual Ocean- Atmosphere Flux Variability on the West Florida Shelf, J. Climate, 16, 734-745, 2003.

  • Voss, K. J., C. D. Mobley, L. K. Sundman, J. E. Ivey and C. H. Mazel, The Spectral Upwelling Radiance Distribution in Optically Shallow Waters, Limnol. Oceanogr., in press, 2003.

  • Walsh, J.J., B. Penta, D.A. Dieterle, and W. P. Bissett, Predictive ecological modeling of harmful algal blooms, Human Ecological Risk Assessment, 7, 1369-1383, 2001

  • Walsh J.J., K.D. Haddad, D.A. Dieterle, R.H. Weisberg, Z. Li, H. Yang, F.E. Muller-Karger, C.A. Heil, and W.P. Bissett, A numerical analysis of landfall of the 1979 red tide of Karenia brevis along the west coast of Florida, Cont. Shelf Res., 22, 15-38, 2001.

  • Walsh, J.J., R.H. Weisberg, D.A. Dieterle, R. He, B.P. Darrow, J.K. Jolliff, K.M. Lester, G.A. Vargo, G.J. Kirkpatrick, K.A. Fanning, T.T. Sutton, A.E. Jochens, D.C. Briggs, B. Nababan, C. Hu, and F. Muller-Karger, The phytoplankton response to intrusions of slope water on the West Florida Shelf: models and observations, J. Geophys. Res., in press, 2003.

  • Warrior, H., K. L. Carder, D. Otis, and B. Galperin, An Improved Heat and Salt Budget Estimation Including Bottom Effects for General Ocean Circulation Models, to be submitted to J. Geophys. Res..

  • Weideman, A. D., D. J. Johnson, R. J. Holyer, W. S. Pegau, L. A. Jugan, and J. C. Sandidge, Remote imaging of internal solitons in the coastal ocean, Rem. Sens. Environ., 76, 260-267, 2001.

  • Weisberg, R.H. and R. He, Local and deep-ocean forcing contributions to anomalous water properties on the West Florida Shelf, J. Geophys. Res., in press, 2003.

  • Weisberg, R. H., L. Zhenjiang, and F. Muller-Karger, West Florida shelf response to local wind forcing: April 1998, J. Geophys. Res., 106, 31239-31262, 2001.
    Abstract.

  • Weisberg, R.H., B. Black and H. Yang, Seasonal modulation of the west Florida shelf circulation, Geophys. Res. Lett., 23, 2247-2250, 1996.

  • Weisberg, R.H., B. Black, Z. Li, An upwelling case study on Florida’s west coast, J. Geophys. Res., 105, 11,459-11,469, 2000.

  • Yang, H. and R.H. Weisberg, Response of the West Florida continental shelf circulation to climatological wind forcing, J. Geophys. Res., 104, 5301-5320, 1999.

  • Yang, H., R.H. Weisberg, P.P. Niiler, W. Sturges, and W. Johnson, Lagrangian circulation and forbidden zone on the West Florida Shelf, Cont. Shelf. Res., 19, 1221-1245, 1999.

  • Zaneveld, J. R. V., E. Boss and Paul A. Hwang, The influence of coherent waves on the remotely sensed reflectance, Optics Express, 9, 260-266, 2001.

  • Zaneveld , J. R. V., E. Boss and A. Barnard, Influence of surface waves on measured and modeled irradiance profiles, Applied Optics, 40, 1442-1449, 2001.

  • Zhang, X., M. Lewis, P. Bissett, and B. Johnson, Optical Influence of Ship Wakes, Appl. Opt., in revision, 2003.

  • Zheng, X., T. Dickey, and G. Chang, Variability of the downwelling diffuse attenuation coefficient with consideration of inelastic scattering, Appl. Opt., 41, 6477-6488, 2002.

    2001 HyCODE PI Reports (*.pdfs)

  • Yogi Agrawal (Sequoia Scientific)
  • Mead Allison (Tulane University)
  • Paul Bissett (LEO-15; FERI)
  • Paul Bissett (WFS; FERI)
  • Larry Brand/Carol Stephens (U. Miami)
  • David Burdige (Old Dominion)
  • Ken Carder/David Costello (USF)
  • Paula Coble (USF)
  • Curt Davis (NRL DC)
  • Alan Decho (Univ. S. Carolina)
  • Tommy Dickey (UCSB)
  • Fred Dobbs/Lisa Drake (Old Dominion)
  • Paul Falkowski/Maxim Gorbunov/Zbigniew Kolber (Rutgers)
  • Jules Jaffe (Scripps)
  • Michael Lesser (U. New Hampshire)
  • Marlon Lewis/Bruce Johnson/Alex Hay (Satlantic, Inc.)
  • Robert Maffione (HOBILabs)
  • Robert Maffione (HOBILabs)
  • Charles Mazel (PSI Corp)
  • Scott McLean (Satlantic, Inc.)
  • Kendall Melville/Eric Terrill/Dariusz Stramski (Scripps)
  • Curt Mobley (CoBOP; Sequoia Scientific)
  • Curt Mobley (LEO-15; Sequoia Scientific)
  • Mark Moline (Cal Poly)
  • Scott Pegau/Emmanuel Boss (OSU)
  • William Philpot (Cornell University)
  • Pamela Reid (PSI corp)
  • Oscar Schofield/Scott Glenn/Dale Haidvogel/Fred Grassle (Rutgers)
  • Ray Smith (UCSB)
  • Michael Strand (Naval Warfare)
  • John Trowbridge (WHOI)
  • Chris Von Alt (WHOI)
  • Ken Voss (U. Miami)
  • John Walsh (USF)
  • Charles Yentsch/David Phinney (Bigelow)
  • Ron Zaneveld/Emmanuel Boss (OSU)
  • Richard Zimmerman (Moss Landing)

    2000 HyCODE PI Reports

  • Robert Arnone (NRL Stennis)
  • Paul Bissett (FERI)
  • Ken Carder (USF)
  • Bill Snyder and Curt Davis (.pdf file*) (NRL DC)
  • Tommy Dickey (.pdf file*) (OPL/UCSB)
  • Ronald Holyer (USM)
  • Albert Hine (USF)
  • Marlon Lewis (.pdf file*) (Satlantic)
  • Robert Maffione (HOBI Labs)
  • Helmut Maske
  • Charles Mazel (PSI)
  • Walt McBride (PSI)
  • Ken Melville and Eric Terrill (.pdf file*) (Scripps)
  • Curt Mobley (.pdf file*) (Sequoia Scientific)
  • Bill Philpot (.pdf file*) (Cornell)
  • Scott Pegau (OSU)
  • Oscar Schofield (Rutgers)
  • Ray Smith (UCSB)
  • John Trowbridge (.pdf file*) (WHOI)
  • John Walsh (.pdf file*) (USF)
  • Bob Weisberg (USF)

    *Free download of Adobe Acrobat Reader

    HyCODE Proposal Abstracts

  • Arnone: SeaWIFS processing and IOP products in preparation for MODIS and NEMO
  • Bissett: Hyperspectral Modeling of Harmful Algal Blooms on the West Florida Shelf
  • Carder: Nowcasting the bottom albedo, depth and optical properties
  • Carder: Optical sensor augmentation of the coastal ocean monitoring and prediction system
  • Davis: Hyperspectral Characterization of the Coastal Ocean
  • Dickey: High Resolution Time Series Measurements of Bio-optical and Physical Variability in the Coastal Ocean as Part of HyCODE
  • Hine: A Multi-Disciplinary Investigation of the Nature and Predictability of Sediment Resuspension in Shallow Water: Its Effect on Water Column and Bottom Optical Properties
  • Holyer: Neural Network Hyperspectral Algorithms
  • Lewis: The influence of bubbles on the backscattering of spectral irradiance in the upper ocean
  • Maffione: Dynamic optical properties, underwater visibility and their relationship to hyperspectral remote-sensing reflectance
  • Maske: ECOHAB: Hyperspectral optical properties of red-tide blooms
  • Mazel: Diver-operated instruments for in situ measurement of optical properties
  • McBride: Transitioning of Hyperspectral Code algorithms to the Fleet
  • Melville: Field measurements of the influence of bubbles on the inherent optical properties of the upper ocean
  • Philpot: Bathymetry and bottom classification using hyperspectral image data: CoBOP and HyCODE
  • Pegau, Boss: Determination of the vertical structure of inherent optical properties from the spectral remotely sensed reflectance
  • Schofield: Hyperspectral remote sensing of the coastal ocean: adaptive sampling and forecasting of nearshore in situ optical properties
  • Smith, Mobley: Modeling coastal ocean optical properties for coupled circulation and ecosystem models
  • Trowbridge, Agrawal: Mid and upper-water column particle size distribution and optical volume scattering function: Diffusion from the boundary layer
  • Walsh: A simulation analysis of the time-dependent roles of phytoplankton and CDOM in effecting the 3-dimensional structure of inherent optical properties on the West Florida shelf
  • Weisberg: Observations and modeling of the West Florida Continental Shelf Circulation: Applications to sediment resuspension, transport, and impacts on inherent optical properties